Miyakogusa Predicted Gene

Lj6g3v0085380.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T856_MEDTR 280 54.3 62.3 (tr|I3T856) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1

TAIR_pep AT3G04310.1 93.6 33.6 46.3 | Symbols: | unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:1141581-1142528 REVERSE LENGTH=269

Medicago Medtr1g045520.1 283 54.7 62.7 | transmembrane protein, putative | HC | chr1:17078248-17082200 | 20130731

Soybean Glyma10g26720.1 266 58.1 66.7

LJGI gnl|LJGI|TC75657 1249 99.8 99.8 similar to UniRef100_A7NXM1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0085380.1 length: 293 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 16-40
75-85
171-183
191-207

Wolf-PSORT

Lj6g3v0085380.1 chlo 10, nucl 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0085380.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T856_MEDTR	280	54.3	62.3	(tr\|I3T856) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep	AT3G04310.1	93.6	33.6	46.3	\| Symbols: \| unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr3:1141581-1142528 REVERSE LENGTH=269
Medicago	Medtr1g045520.1	283	54.7	62.7	\| transmembrane protein, putative \| HC \| chr1:17078248-17082200 \| 20130731
Soybean	Glyma10g26720.1	266	58.1	66.7
LJGI	gnl\|LJGI\|TC75657	1249	99.8	99.8	similar to UniRef100_A7NXM1 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)

no_ID
Lj6g3v0085380.1				length: 293 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	16-40 75-85 171-183 191-207