Miyakogusa Predicted Gene

Lj6g3v0056740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NEQ2_SOYBN 785 80.2 82.7 (tr|I1NEQ2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G04300.1 590 63.0 73.6 | Symbols: | TRAF-like superfamily protein | chr1:1148818-1153895 REVERSE LENGTH=1074
Medicago Medtr1g044450.2 756 77.3 81.2 | meprin and TRAF (MATH)-like domain protein | HC | chr1:16771154-16782814 | 20130731
Soybean Glyma20g21660.1 785 80.2 82.7  
LJGI gnl|LJGI|TC70736 1176 100.0 100.0 homologue to UniRef100_A7NX31 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0056740.1 length: 480 aa.
IPR002083 MATH
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00917 MATH 1.2e-19 73-190
HMMSmart SM00061 meprin 4.4e-16 68-172
ProfileScan PS50144 MATH 28.087 66-189
IPR008974 TRAF-like
Molecular Function GO:0005515 protein binding    
superfamily SSF49599 TRAF 6e-33 63-201
no_ID  
Coil coil coiled-coil NA 297-318
Gene3D G3DSA:2.60.210.10 no description 1.6e-18 65-192
HMMPanther PTHR24006 FAMILY 1.7e-185 52-315
HMMPanther PTHR24006:SF20 SUBFAMILY 1.7e-185 52-315
Seg seg seg NA 43-63
332-341
376-391
440-459
Wolf-PSORT
Lj6g3v0056740.1	nucl 11, chlo 1, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0056740.1