Miyakogusa Predicted Gene

Lj6g3v0043500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L7J9_SOYBN 187 79.0 83.1 (tr|I1L7J9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G14465.1 161 65.0 78.0 | Symbols: AHL20 | AT-hook motif nuclear-localized protein 20 | chr4:8320972-8321817 FORWARD LENGTH=281
Medicago Medtr1g073860.1 174 77.1 80.5 | AT hook motif DNA-binding family protein | HC | chr1:32805058-32802541 | 20130731
Soybean Glyma20g21810.1 187 79.0 82.3  
LJGI gnl|LJGI|TC75749 531 100.0 100.0 similar to UniRef100_A1DR81 Cluster: AT-hook DNA-binding protein; n=1; Catharanthus roseus|Rep: AT-hook DNA-binding protein - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0043500.1 length: 193 aa.
IPR005175 Domain of unknown function DUF296
method AccNumber shortName E-value location
HMMPfam PF03479 DUF296 1.9e-38 1-113
IPR014476 Predicted AT-hook DNA-binding
HMMPIR PIRSF016021 Predicted 6.1e-65 1-193
no_ID  
Gene3D G3DSA:3.30.1330.80 no description 5.3e-33 2-121
HMMPanther PTHR31100 FAMILY 5.2e-89 1-193
Seg seg seg NA 79-99
125-160
161-177
superfamily SSF117856 AF0104/ALDC/Ptd012-like 3.9e-32 1-122
Wolf-PSORT
Lj6g3v0043500.1	chlo 4, cyto 4, E.R._plas 2, plas 1.5, E.R. 1.5, nucl 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0043500.1