Miyakogusa Predicted Gene
- Lj6g3v0030000.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
E8Z9A1_SOYBN |
251 |
84.6 |
85.3 |
(tr|E8Z9A1) Phosphate transporter1-3 OS=Glycine max GN=Pht1-3 PE=2 SV=1 |
| TAIR_pep |
AT3G54700.1 |
229 |
76.9 |
81.1 |
| Symbols: PHT1;7 | phosphate transporter 1;7 | chr3:20248463-20250070 REVERSE LENGTH=535 |
| Medicago |
Medtr1g043220.2 |
243 |
80.4 |
85.3 |
| high affinity inorganic phosphate transporter | HC | chr1:16183227-16185712 | 20130731 |
| Soybean |
Glyma10g00950.1 |
251 |
84.6 |
85.3 |
|
| LJGI |
gnl|LJGI|TC66010 |
573 |
91.8 |
91.8 |
similar to UniRef100_Q9AVR0 Cluster: Phosphate transporter; n=1; Sesbania rostrata|Rep: Phosphate transporter - Sesbania rostrata, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0030000.1 |
length: 143 aa. |
| IPR005828 |
General substrate transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0022857 |
transmembrane transporter activity |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF00083 |
Sugar_tr |
3.7e-15 |
27-132 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
6.5e-11 |
10-132 |
| IPR020846 |
Major facilitator superfamily domain |
| ProfileScan |
PS50850 |
MFS |
9.612 |
1-143 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
1.4e-07 |
17-129 |
| HMMPanther |
PTHR24064 |
FAMILY |
2.2e-62 |
9-129 |
| HMMPanther |
PTHR24064:SF0 |
SUBFAMILY |
2.2e-62 |
9-129 |
| Seg |
seg |
seg |
NA |
109-126 |
- Wolf-PSORT
Lj6g3v0030000.1 cyto 4.5, mito 4, cyto_nucl 3, chlo_mito 3, chlo 2, E.R. 2, cyto_mito 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0030000.1 |
|