| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7I4N4_MEDTR | 1351 | 64.7 | 72.8 | (tr|G7I4N4) Serine/threonine protein kinase Nek9 OS=Medicago truncatula GN=MTR_1g042800 PE=4 SV=1 |
| TAIR_pep | AT4G14368.1 | 1028 | 53.0 | 65.1 | | Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr4:8274279-8278810 REVERSE LENGTH=1106 |
| Medicago | Medtr1g042800.1 | 1355 | 64.9 | 73.1 | | chromosome condensation regulator RCC1 repeat protein | HC | chr1:16011888-16018401 | 20130731 |
| Soybean | Glyma10g00900.1 | 1129 | 56.9 | 65.6 | |
| LJGI | gnl|LJGI|TC72865 | 67.9 | 82.7 | 82.7 | homologue to UniRef100_A7QMY3 Cluster: Chromosome undetermined scaffold_129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%) |
| Lj6g3v0028840.1 | length: 1079 aa. | |||
| IPR000306 | Zinc finger, FYVE-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0046872 | metal ion binding | ||
| HMMPfam | PF01363 | FYVE | 1.1e-14 | 600-665 |
| HMMSmart | SM00064 | Protein | 3.7e-21 | 598-667 |
| IPR000408 | Regulator of chromosome condensation, RCC1 | |||
| FPrintScan | PR00633 | RCCNDNSATION | 1.6e-13 | 279-295 329-345 370-386 386-400 485-503 543-564 |
| HMMPfam | PF00415 | RCC1 | 1.6e-14 | 277-325 328-379 383-432 446-492 495-544 549-596 |
| PatternScan | PS00626 | RCC1_2 | NA | 422-432 |
| ProfileScan | PS50012 | RCC1_3 | 13.981 | 277-328 329-383 384-435 444-495 496-547 548-599 |
| IPR001849 | Pleckstrin homology domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0005543 | phospholipid binding | ||
| ProfileScan | PS50003 | PH_DOMAIN | 6.877 | 84-117 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | |||
| Gene3D | G3DSA:2.130.10.30 | no description | 1.3e-95 | 218-600 |
| superfamily | SSF50985 | RCC1/BLIP-II | 1.6e-91 | 218-603 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 4.9e-18 | 599-667 |
| IPR011993 | Pleckstrin homology-like domain | |||
| Gene3D | G3DSA:2.30.29.30 | no description | 3.4e-37 | 6-124 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 5.3e-16 | 601-670 |
| IPR013591 | Brevis radix-like domain | |||
| HMMPfam | PF08381 | BRX | 8.5e-25 | 995-1051 |
| ProfileScan | PS51514 | BRX | 29.536 | 996-1051 |
| IPR017455 | Zinc finger, FYVE-related | |||
| ProfileScan | PS50178 | ZF_FYVE | 11.540 | 604-666 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 802-844 |
| HMMPanther | PTHR22870 | REGULATOR | 0 | 23-1065 |
| HMMPanther | PTHR22870:SF87 | HYPOTHETICAL | 0 | 23-1065 |
| HMMPfam | PF13713 | BRX_N | 7.8e-06 | 853-883 |
| Seg | seg | seg | NA | 158-170 190-203 636-654 751-762 777-800 803-813 1017-1031 |
| superfamily | SSF50729 | PH | 2.2e-25 | 4-117 |
Lj6g3v0028840.1 nucl 13
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v0028840.1 |