Miyakogusa Predicted Gene

Lj6g3v0028740.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JB61_SOYBN 703 62.4 69.3 (tr|I1JB61) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G69070.1 476 45.9 58.8 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). | chr1:25967421-25971389 REVERSE LENGTH=901
Medicago Medtr1g442830.1 657 59.0 68.0 | Nop14 nucleolar-like protein | HC | chr1:15941855-15950679 | 20130731
Soybean Glyma02g00570.1 702 62.4 69.3  
LJGI gnl|LJGI|TC75868 613 100.0 100.0 similar to UniRef100_A7P2C0 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0028740.2 length: 561 aa.
IPR007276 Nucleolar protein 14
method AccNumber shortName E-value location
Cellular Component GO:0032040 small-subunit processome    
HMMPanther PTHR23183 NOP14 8e-128 1-561
HMMPfam PF04147 Nop14 1.1e-121 1-561
no_ID  
Coil coil coiled-coil NA 13-48
HMMPanther PTHR23183:SF0 SUBFAMILY 8e-128 1-561
Seg seg seg NA 22-37
42-71
108-135
157-176
308-320
Wolf-PSORT
Lj6g3v0028740.2	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0028740.2