Miyakogusa Predicted Gene

Lj6g3v0027680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I3R9_MEDTR 931 92.5 95.9 (tr|G7I3R9) NADH-quinone oxidoreductase subunit F OS=Medicago truncatula GN=MTR_1g042300 PE=1 SV=1
TAIR_pep AT5G08530.1 870 89.4 94.2 | Symbols: CI51 | 51 kDa subunit of complex I | chr5:2759848-2761726 REVERSE LENGTH=486
Medicago Medtr1g042300.2 934 92.5 95.9 | NADH-ubiquinone oxidoreductase 51 kDa subunit | HC | chr1:15784412-15780393 | 20130731
Soybean Glyma10g00820.1 922 91.5 95.4  
LJGI gnl|LJGI|TC78405 2153 99.7 99.7 homologue to UniRef100_Q8LAL7 Cluster: NADH dehydrogenase; n=1; Arabidopsis thaliana|Rep: NADH dehydrogenase - Arabidopsis thaliana (Mouse-ear cress), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0027680.1 length: 483 aa.
IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0008137 NADH dehydrogenase (ubiquinone) activity    
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00644 COMPLEX1_51K_1 NA 220-235
PatternScan PS00645 COMPLEX1_51K_2 NA 397-408
IPR011537 NADH ubiquinone oxidoreductase, F subunit
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016651 oxidoreductase activity, acting on NAD(P)H    
Molecular Function GO:0051287 NAD binding    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR01959 nuoF_fam: 1.6e-190 61-470
IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit
Molecular Function GO:0016651 oxidoreductase activity, acting on NAD(P)H    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMPfam PF01512 Complex1_51K 8.8e-45 100-269
IPR019554 Soluble ligand binding domain
HMMPfam PF10531 SLBB 8.2e-09 296-345
IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF10589 NADH_4Fe-4S 6.8e-17 384-429
HMMSmart SM00928 NADH-ubiquinone 1.4e-24 384-429
no_ID  
HMMPanther PTHR11780 NADH-UBIQUINONE 1.3e-284 38-481
Seg seg seg NA 38-47
superfamily SSF140490 Nqo1C-terminal 1.8e-35 380-472
superfamily SSF142019 Nqo1 2.6e-84 51-293
superfamily SSF142984 Nqo1 1.3e-25 294-379
Wolf-PSORT
Lj6g3v0027680.1	mito 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0027680.1