Miyakogusa Predicted Gene
- Lj6g3v0024590.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A9PHD1_POPTR |
138 |
67.0 |
79.4 |
(tr|A9PHD1) Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 |
| TAIR_pep |
AT2G33430.1 |
133 |
67.0 |
78.4 |
| Symbols: DAL1, DAL | differentiation and greening-like 1 | chr2:14162732-14164729 FORWARD LENGTH=219 |
| Medicago |
Medtr1g041745.1 |
131 |
64.9 |
78.4 |
| plastid developmental protein DAG | HC | chr1:15695728-15692169 | 20130731 |
| Soybean |
Glyma10g00780.1 |
135 |
63.9 |
81.4 |
|
| LJGI |
gnl|LJGI|TC64965 |
537 |
100.0 |
100.0 |
similar to UniRef100_A7NXF9 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0024590.1 |
length: 111 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31346 |
FAMILY |
5.9e-36 |
19-96 |
- Wolf-PSORT
Lj6g3v0024590.1 chlo 5, extr 4, plas 2, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, golg_plas 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0024590.1 |
|