Miyakogusa Predicted Gene
- Lj6g3v0003450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T5Q5_LOTJA |
262 |
100.0 |
100.0 |
(tr|I3T5Q5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G20450.1 |
220 |
83.5 |
90.2 |
| Symbols: | Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134 |
| Medicago |
Medtr4g120770.1 |
234 |
87.2 |
93.2 |
| 60S ribosomal L14-like protein | HC | chr4:50003492-50006693 | 20130731 |
| Soybean |
Glyma02g00680.1 |
240 |
88.0 |
95.5 |
|
| LJGI |
gnl|LJGI|TC70302 |
797 |
100.0 |
100.0 |
similar to UniRef100_A7NXE0 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0003450.1 |
length: 133 aa. |
| IPR002784 |
Ribosomal protein L14 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| HMMPfam |
PF01929 |
Ribosomal_L14e |
7.1e-28 |
45-118 |
| IPR014722 |
Ribosomal protein L2 domain 2 |
| Gene3D |
G3DSA:2.30.30.30 |
no description |
1.4e-23 |
4-86 |
| no_ID |
|
| HMMPanther |
PTHR11127 |
60S |
1.8e-69 |
1-133 |
| HMMPanther |
PTHR11127:SF0 |
SUBFAMILY |
1.8e-69 |
1-133 |
- Wolf-PSORT
Lj6g3v0003450.1 cyto 7, plas 3, mito 2, vacu 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0003450.1 |
|