Miyakogusa Predicted Gene

Lj6g3v0003350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TJ63_SOYBN 619 93.1 96.5 (tr|C6TJ63) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G04190.1 516 76.9 88.1 | Symbols: TPR3 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1106617-1108557 REVERSE LENGTH=328
Medicago Medtr1g041435.1 594 88.7 94.3 | RNA polymerase II-associated-like protein | HC | chr1:15516239-15508773 | 20130731
Soybean Glyma02g00700.1 619 93.1 96.5  
LJGI gnl|LJGI|TC75804 1897 100.0 100.0 similar to UniRef100_A7NWS6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0003350.1 length: 318 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 1.3e-06 80-111
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.9e-34 13-135
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 23.846 11-112
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 6.4e-05 11-44
45-78
79-112
ProfileScan PS50005 TPR 10.178 11-44
45-78
79-112
no_ID  
Coil coil coiled-coil NA 51-72
HMMPanther PTHR22904 TPR 1.6e-103 10-293
HMMPanther PTHR22904:SF43 SUBFAMILY 1.6e-103 10-293
HMMPfam PF13414 TPR_11 4.4e-18 12-76
superfamily SSF48452 TPR-like 7.6e-34 9-125
Wolf-PSORT
Lj6g3v0003350.1	nucl 11, chlo 1, cyto 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0003350.1