Miyakogusa Predicted Gene

Lj6g3v0002280.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LGP7_SOYBN 375 51.7 66.7 (tr|K7LGP7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G62670.1 228 35.6 60.1 | Symbols: RPF2 | rna processing factor 2 | chr1:23204773-23206665 REVERSE LENGTH=630
Medicago Medtr0308s0020.1 293 41.9 64.8 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma10g00540.1 375 51.7 66.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0002280.2 length: 378 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 7.8e-16 33-82
99-146
168-217
270-319
HMMTigr TIGR00756 PPR: 5.1e-11 36-70
102-135
136-170
172-205
274-306
ProfileScan PS51375 PPR 7.750 34-68
1-32
99-133
69-95
134-168
169-203
204-238
271-305
306-336
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5.3e-07 96-337
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-98 1-331
HMMPanther PTHR24015:SF0 SUBFAMILY 1.8e-98 1-331
superfamily SSF48452 TPR-like 0.00024 134-232
Wolf-PSORT
Lj6g3v0002280.2	cyto 10, nucl 1, mito 1, plas 1, golg 1, nucl_plas 1, golg_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0002280.2