Miyakogusa Predicted Gene

Lj6g3v0001220.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL Q2PES3_TRIPR 758 73.3 83.1 (tr|Q2PES3) Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1

TAIR_pep AT3G55760.3 613 60.3 73.0 | Symbols: | unknown protein; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2). | chr3:20700648-20702886 FORWARD LENGTH=578

Medicago Medtr1g041275.1 768 73.3 83.7 | hypothetical protein | HC | chr1:15338480-15342590 | 20130731

Soybean Glyma02g00430.1 699 65.4 73.9

LJGI gnl|LJGI|TC71266 1590 99.5 99.5 similar to UniRef100_A7NWX7 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0001220.1 length: 549 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 30-43
109-119

Wolf-PSORT

Lj6g3v0001220.1 nucl 6, chlo 4, extr 2, mito 1, pero 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0001220.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	Q2PES3_TRIPR	758	73.3	83.1	(tr\|Q2PES3) Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1
TAIR_pep	AT3G55760.3	613	60.3	73.0	\| Symbols: \| unknown protein; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2). \| chr3:20700648-20702886 FORWARD LENGTH=578
Medicago	Medtr1g041275.1	768	73.3	83.7	\| hypothetical protein \| HC \| chr1:15338480-15342590 \| 20130731
Soybean	Glyma02g00430.1	699	65.4	73.9
LJGI	gnl\|LJGI\|TC71266	1590	99.5	99.5	similar to UniRef100_A7NWX7 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)

no_ID
Lj6g3v0001220.1				length: 549 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	30-43 109-119