Miyakogusa Predicted Gene

Lj5g3v2300390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NJC2_SOYBN 1035 83.6 90.1 (tr|I1NJC2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G13030.1 945 77.0 87.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). | chr5:4133216-4136461 FORWARD LENGTH=633
Medicago Medtr1g116875.1 1079 85.6 91.4 | UPF0061 AZOSEA38000-like protein | HC | chr1:52793035-52786777 | 20130731
Soybean Glyma20g39090.1 1035 83.6 90.1  
LJGI gnl|LJGI|TC80432 1304 99.7 99.7 similar to UniRef100_A7NZZ2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2300390.1 length: 615 aa.
IPR003846 Uncharacterised protein family UPF0061
method AccNumber shortName E-value location
HAMAP MF_00692 UPF0061 41.019 75-598
HMMPfam PF02696 UPF0061 3.4e-114 146-586
no_ID  
HMMPanther PTHR32057 FAMILY 0 74-615
HMMPanther PTHR32057:SF5 SUBFAMILY 0 74-615
Seg seg seg NA 4-19
Wolf-PSORT
Lj5g3v2300390.1	chlo 12, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2300390.1