Miyakogusa Predicted Gene
- Lj5g3v2300310.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LHW3_SOYBN |
273 |
57.4 |
74.3 |
(tr|I1LHW3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G18193.1 |
263 |
57.3 |
74.5 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:7917621-7919184 REVERSE LENGTH=495 |
| Medicago |
Medtr3g103150.1 |
263 |
58.4 |
76.1 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr3:47547550-47546442 | 20130731 |
| Soybean |
Glyma11g07640.1 |
273 |
57.4 |
74.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2300310.1 |
length: 240 aa. |
| IPR003593 |
AAA+ ATPase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0017111 |
nucleoside-triphosphatase activity |
|
|
| HMMSmart |
SM00382 |
ATPases |
3.1e-05 |
35-168 |
| IPR003959 |
ATPase, AAA-type, core |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPfam |
PF00004 |
AAA |
3.6e-19 |
40-165 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
3.8e-41 |
11-229 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.8e-33 |
16-162 |
| HMMPanther |
PTHR23070 |
BCS1 |
1.3e-110 |
2-236 |
| HMMPanther |
PTHR23070:SF1 |
AAA-TYPE |
1.3e-110 |
2-236 |
- Wolf-PSORT
Lj5g3v2300310.1 cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2300310.1 |
|