Miyakogusa Predicted Gene

Lj5g3v2298210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K4F6_SOYBN 1070 79.0 84.6 (tr|K7K4F6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39350.1 695 50.3 70.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15750929-15752962 FORWARD LENGTH=677
Medicago Medtr1g112500.1 1030 74.3 84.1 | pentatricopeptide (PPR) repeat protein | HC | chr1:50925869-50923259 | 20130731
Soybean Glyma01g38300.1 1017 83.4 89.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2298210.1 length: 668 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.092 255-279
559-583
HMMPfam PF13041 PPR_2 8.6e-14 80-126
180-226
281-327
386-428
484-532
HMMPfam PF13812 PPR_3 0.074 153-179
HMMTigr TIGR00756 PPR: 0.00022 80-111
182-216
283-316
386-417
488-520
522-550
ProfileScan PS51375 PPR 6.445 11-45
78-112
180-214
149-179
114-148
281-315
250-280
215-249
316-350
382-416
417-451
485-519
520-550
556-586
622-656
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-07 615-643
no_ID  
HMMPanther PTHR24015 FAMILY 2.3e-218 1-668
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 2.3e-218 1-668
Seg seg seg NA 39-69
482-495
Wolf-PSORT
Lj5g3v2298210.1	mito 7, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2298210.1