Miyakogusa Predicted Gene

Lj5g3v2298200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LM67_SOYBN 499 61.5 70.0 (tr|K7LM67) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G54380.1 229 34.6 49.5 | Symbols: | spliceosome protein-related | chr1:20298287-20300899 REVERSE LENGTH=515
Medicago Medtr1g116530.1 461 59.0 65.2 | survival motor neuron interacting protein | HC | chr1:52721123-52724180 | 20130731
Soybean Glyma10g44220.1 442 54.3 64.1  
LJGI gnl|LJGI|TC63992 1429 99.9 99.9 similar to UniRef100_A7QS54 Cluster: Chromosome chr5 scaffold_156, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_156, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2298200.1 length: 510 aa.
IPR007022 Survival motor neuron interacting protein 1
method AccNumber shortName E-value location
Biological Process GO:0000245 spliceosomal complex assembly    
Biological Process GO:0000398 mRNA splicing, via spliceosome    
HMMPanther PTHR12794 GEMIN2 1.1e-51 196-507
no_ID  
Coil coil coiled-coil NA 26-47
HMMPanther PTHR12794:SF0 SUBFAMILY 1.1e-51 196-507
HMMPfam PF04938 SIP1 7.4e-61 247-508
Seg seg seg NA 24-48
110-121
230-241
Wolf-PSORT
Lj5g3v2298200.1	cyto 9, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2298200.1