Miyakogusa Predicted Gene

Lj5g3v2298190.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7N5G5_SOYBN 506 63.4 71.0 (tr|K7N5G5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G43235.1 313 49.0 66.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:17968910-17970822 REVERSE LENGTH=437

Medicago Medtr1g116540.1 455 66.8 75.9 | hypothetical protein | HC | chr1:52724529-52728577 | 20130731

Soybean Glyma20g39010.1 457 65.1 72.0

LJGI gnl|LJGI|DC598814 1140 100.0 100.0 homologue to UniRef100_A7QS71 Cluster: Chromosome chr5 scaffold_156, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_156, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v2298190.1 length: 430 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 32-42
43-61
77-88
321-333
369-379

Wolf-PSORT

Lj5g3v2298190.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v2298190.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7N5G5_SOYBN	506	63.4	71.0	(tr\|K7N5G5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G43235.1	313	49.0	66.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). \| chr2:17968910-17970822 REVERSE LENGTH=437
Medicago	Medtr1g116540.1	455	66.8	75.9	\| hypothetical protein \| HC \| chr1:52724529-52728577 \| 20130731
Soybean	Glyma20g39010.1	457	65.1	72.0
LJGI	gnl\|LJGI\|DC598814	1140	100.0	100.0	homologue to UniRef100_A7QS71 Cluster: Chromosome chr5 scaffold_156, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_156, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

no_ID
Lj5g3v2298190.1				length: 430 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	32-42 43-61 77-88 321-333 369-379