Miyakogusa Predicted Gene

Lj5g3v2297780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K7U1_SOYBN 410 90.7 94.7 (tr|I1K7U1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G19330.2 319 77.0 82.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:6680824-6683290 REVERSE LENGTH=242
Medicago Medtr3g111670.1 399 88.3 91.3 | histone deacetylase complex subunit SAP30 Sin3-binding protein | HC | chr3:52221434-52217445 | 20130731
Soybean Glyma06g03710.1 411 91.1 95.6  
LJGI gnl|LJGI|TC77224 1366 99.9 99.9 similar to UniRef100_A7NTI3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2297780.1 length: 230 aa.
IPR024145 Histone deacetylase complex subunit SAP30/SAP30-like
method AccNumber shortName E-value location
HMMPanther PTHR13286 SAP30 1.3e-120 6-224
IPR025718 Histone deacetylase complex subunit SAP30, Sin3 binding domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF13867 SAP30_Sin3_bdg 5.6e-22 168-221
no_ID  
HMMPanther PTHR13286:SF4 SUBFAMILY 1.3e-120 6-224
Wolf-PSORT
Lj5g3v2297780.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2297780.1 Not targeted -55.459 -0.025 -8.155 83.17% -47.279