Miyakogusa Predicted Gene

Lj5g3v2288630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7N6_LOTJA 664 96.1 96.4 (tr|I3T7N6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G55140.1 547 78.2 86.8 | Symbols: | Pectin lyase-like superfamily protein | chr3:20438819-20440225 FORWARD LENGTH=331
Medicago Medtr1g115550.1 580 84.9 91.0 | pectate lyase family protein | HC | chr1:52233018-52230795 | 20130731
Soybean Glyma20g38490.1 574 84.1 90.4  
LJGI gnl|LJGI|TC75637 1951 99.7 99.7 similar to UniRef100_A7Q434 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2288630.1 length: 331 aa.
IPR002022 Pectate lyase/Amb allergen
method AccNumber shortName E-value location
HMMPfam PF00544 Pec_lyase_C 1.8e-40 62-238
HMMSmart SM00656 no description 4.5e-32 32-245
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 7.6e-83 18-331
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 9.9e-100 6-305
IPR018082 AmbAllergen
FPrintScan PR00807 AMBALLERGEN 1.6e-10 20-37
200-219
222-241
no_ID  
HMMPanther PTHR31683 FAMILY 2.2e-133 4-328
HMMPanther PTHR31683:SF0 SUBFAMILY 2.2e-133 4-328
Seg seg seg NA 243-254
Wolf-PSORT
Lj5g3v2288630.1	cysk 8, cyto 4, cysk_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2288630.1