Miyakogusa Predicted Gene

Lj5g3v2288560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NJ60_SOYBN 412 75.7 79.7 (tr|I1NJ60) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G80480.1 392 71.5 78.1 | Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444
Medicago Medtr1g115505.1 427 78.8 82.4 | cobalamin biosynthesis protein | HC | chr1:52194306-52199057 | 20130731
Soybean Glyma10g43740.1 421 77.2 80.4  
LJGI gnl|LJGI|TC66191 525 100.0 100.0 homologue to UniRef100_A7QQ80 Cluster: Chromosome undetermined scaffold_141, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_141, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2288560.1 length: 274 aa.
IPR003495 CobW/HypB/UreG domain
method AccNumber shortName E-value location
HMMPfam PF02492 cobW 2.4e-31 2-129
IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
Gene3D G3DSA:3.30.1220.10 no description 1.8e-26 190-273
HMMPfam PF07683 CobW_C 3.4e-08 209-273
superfamily SSF90002 Hypothetical 4.9e-14 209-273
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.6e-20 3-171
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3e-48 1-150
HMMPanther PTHR13748 COBW-RELATED 5.1e-144 1-271
HMMPanther PTHR13748:SF11 PRLI-INTERACTING 5.1e-144 1-271
Seg seg seg NA 165-206
Wolf-PSORT
Lj5g3v2288560.1	chlo 5, cyto 5, pero 2, nucl 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2288560.1