Miyakogusa Predicted Gene

Lj5g3v2267380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J375_MEDTR 416 82.9 90.0 (tr|G7J375) Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein OS=Medicago truncatula GN=MTR_3g086770 PE=4 SV=1
TAIR_pep AT5G10370.1 276 54.8 73.4 | Symbols: | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related | chr5:3261245-3267188 FORWARD LENGTH=1775
Medicago Medtr3g086770.1 416 82.9 90.0 | helicase, IBR and zinc finger protein | HC | chr3:39323283-39316838 | 20130731
Soybean Glyma18g01820.1 400 77.9 87.9  
LJGI gnl|LJGI|TC77032 1352 98.9 98.9 similar to UniRef100_A7R0H0 Cluster: Chromosome undetermined scaffold_309, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_309, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2267380.1 length: 240 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 8.890 141-183
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.6e-07 127-200
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 157-166
no_ID  
HMMPanther PTHR11685 ARIADNE 1.5e-12 94-239
HMMPanther PTHR11685:SF56 PUTATIVE 1.5e-12 94-239
superfamily SSF57850 RING/U-box 2.4e-11 134-233
Wolf-PSORT
Lj5g3v2267380.1	nucl 8, cyto 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2267380.1