Miyakogusa Predicted Gene
- Lj5g3v2266340.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MYP1_SOYBN |
846 |
77.9 |
86.1 |
(tr|I1MYP1) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G10370.1 |
623 |
57.0 |
73.0 |
| Symbols: | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related | chr5:3261245-3267188 FORWARD LENGTH=1775 |
| Medicago |
Medtr3g086770.1 |
810 |
76.2 |
81.6 |
| helicase, IBR and zinc finger protein | HC | chr3:39323283-39316838 | 20130731 |
| Soybean |
Glyma18g01820.1 |
848 |
77.9 |
86.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2266340.1 |
length: 552 aa. |
| IPR007502 |
Helicase-associated domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004386 |
helicase activity |
|
|
| HMMPfam |
PF04408 |
HA2 |
4.1e-14 |
25-120 |
| HMMSmart |
SM00847 |
Helicase |
1.1e-10 |
24-120 |
| IPR011709 |
Domain of unknown function DUF1605 |
| HMMPfam |
PF07717 |
OB_NTP_bind |
2.7e-09 |
187-262 |
| no_ID |
|
| HMMPanther |
PTHR18934 |
ATP-DEPENDENT |
3.6e-43 |
19-262 |
- Wolf-PSORT
Lj5g3v2266340.1 chlo 10, mito 2, nucl 1, cyto 1, cyto_nucl 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2266340.1 |
|