Miyakogusa Predicted Gene

Lj5g3v2263880.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N2P1_SOYBN 875 67.4 75.0 (tr|K7N2P1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G50410.1 632 57.4 68.0 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:18672828-18677365 FORWARD LENGTH=981
Medicago Medtr1g115215.2 874 63.6 70.3 | chromatin remodeling protein | HC | chr1:51892999-51882725 | 20130731
Soybean Glyma10g43430.1 801 63.5 71.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2263880.2 length: 756 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 1.3e-73 324-734
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.6e-28 317-633
ProfileScan PS51192 HELICASE_ATP_BIND_1 12.458 336-618
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.8e-10 288-656
663-734
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2e-26 544-616
HMMPanther PTHR10799 SWI/SNF-RELATED 2.5e-189 47-756
HMMPanther PTHR10799:SF133SNF2 DOMAIN-CONTAINING 2.5e-189 47-756
Seg seg seg NA 59-79
100-118
389-400
426-440
527-546
Wolf-PSORT
Lj5g3v2263880.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2263880.2