Miyakogusa Predicted Gene

Lj5g3v2262850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LFB3_SOYBN 892 80.4 86.5 (tr|I1LFB3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G23400.1 666 57.1 72.7 | Symbols: | Leucine-rich repeat (LRR) family protein | chr5:7880603-7882372 FORWARD LENGTH=589
Medicago Medtr1g115225.1 914 78.3 86.0 | LRR receptor-like kinase | HC | chr1:51911627-51909324 | 20130731
Soybean Glyma10g43450.1 892 80.4 86.5  
LJGI gnl|LJGI|TC63562 1259 99.7 99.7 similar to UniRef100_A7QNM9 Cluster: Chromosome undetermined scaffold_133, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_133, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2262850.1 length: 590 aa.
IPR003591 Leucine-rich repeat, typical subtype
method AccNumber shortName E-value location
HMMSmart SM00369 Leucine-rich 58 135-158
159-183
207-231
255-278
279-303
399-428
495-519
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 5.9e-10 37-77
no_ID  
FPrintScan PR00019 LEURICHRPT 6.2e-05 210-223
279-292
Gene3D G3DSA:3.80.10.10 no description 1.1e-28 35-321
325-439
448-562
HMMPanther PTHR24420 FAMILY 1.2e-125 95-590
HMMPfam PF13855 LRR_8 9.4e-07 160-220
233-292
354-412
449-508
Seg seg seg NA 251-268
superfamily SSF52058 L 4.7e-45 33-341
353-589
Wolf-PSORT
Lj5g3v2262850.1	vacu 7, chlo 3, nucl 1, plas 1, extr 1, E.R. 1, nucl_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2262850.1