Miyakogusa Predicted Gene

Lj5g3v2259680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NF47_SOYBN 347 59.4 64.7 (tr|I1NF47) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G64920.1 183 64.7 78.0 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:25944338-25945342 REVERSE LENGTH=334
Medicago Medtr1g114620.1 320 54.3 63.4 | zinc finger, C3HC4 type (RING finger) protein | HC | chr1:51742171-51743858 | 20130731
Soybean Glyma20g23550.1 347 59.4 64.7  
LJGI gnl|LJGI|TC79057 1965 100.0 100.0 weakly similar to UniRef100_Q0DAS8 Cluster: Os06g0633500 protein; n=2; Oryza sativa|Rep: Os06g0633500 protein - Oryza sativa subsp. japonica (Rice), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2259680.1 length: 329 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.1e-14 260-301
HMMSmart SM00184 Ring 9.1e-09 260-300
ProfileScan PS50089 ZF_RING_2 12.297 260-301
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.4e-16 256-304
no_ID  
HMMPanther PTHR22763 RING 4.1e-61 3-317
HMMPanther PTHR22763:SF0 SUBFAMILY 4.1e-61 3-317
HMMPfam PF14369 zf-RING_3 1.6e-09 17-50
Seg seg seg NA 50-63
79-105
112-134
146-166
312-327
superfamily SSF57850 RING/U-box 1.5e-18 259-307
Wolf-PSORT
Lj5g3v2259680.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2259680.1