Miyakogusa Predicted Gene

Lj5g3v2258480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N2R3_SOYBN 920 83.8 89.9 (tr|K7N2R3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G08305.1 615 58.1 76.9 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:2670134-2671738 REVERSE LENGTH=534
Medicago Medtr1g114220.1 889 81.0 88.4 | PPR containing plant-like protein | HC | chr1:51543346-51541694 | 20130731
Soybean Glyma20g23810.1 920 83.8 89.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2258480.1 length: 526 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.22 81-110
153-179
181-210
213-239
285-305
HMMPfam PF13041 PPR_2 7.5e-10 313-360
HMMTigr TIGR00756 PPR: 0.00018 81-113
181-211
213-241
316-349
350-383
ProfileScan PS51375 PPR 6.555 78-112
210-244
179-209
148-178
245-279
313-347
280-310
348-382
383-413
449-483
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.8e-07 425-470
no_ID  
HMMPanther PTHR24015 FAMILY 7.5e-217 31-524
HMMPanther PTHR24015:SF132PENTATRICOPEPTIDE (PPR) 7.5e-217 31-524
Seg seg seg NA 353-360
Wolf-PSORT
Lj5g3v2258480.1	chlo 7, cyto 3, extr 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2258480.1