Miyakogusa Predicted Gene

Lj5g3v2258440.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LLZ6_SOYBN 1106 67.9 77.9 (tr|K7LLZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G62310.1 660 48.5 61.9 | Symbols: | transcription factor jumonji (jmjC) domain-containing protein | chr1:23036039-23039301 REVERSE LENGTH=883
Medicago Medtr1g114150.1 1071 68.1 78.1 | transcription factor jumonji (JmjC) domain protein | HC | chr1:51495110-51508406 | 20130731
Soybean Glyma10g43080.1 1058 67.7 78.5  
LJGI gnl|LJGI|TC67101 1179 100.0 100.0 similar to UniRef100_A7Q7J4 Cluster: Chromosome undetermined scaffold_60, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_60, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2258440.1 length: 928 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.199 182-229
IPR003347 JmjC domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF02373 JmjC 2.4e-15 770-869
HMMSmart SM00558 A 2.7e-73 607-886
ProfileScan PS51184 JMJC 27.686 626-886
no_ID  
Gene3D G3DSA:2.60.120.650 no description 0.00034 828-869
HMMPanther PTHR12549 JMJC 0 53-925
HMMPanther PTHR12549:SF1 TRANSCRIPTION 0 53-925
Seg seg seg NA 3-21
32-52
107-122
126-139
190-203
superfamily SSF51197 Clavaminate 2.1e-39 505-924
Wolf-PSORT
Lj5g3v2258440.1	nucl 3, cyto 3, cyto_nucl 3, plas 2, vacu 2, E.R. 2, golg 2, golg_plas 2, E.R._vacu 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2258440.1