Miyakogusa Predicted Gene

Lj5g3v2258370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NF70_SOYBN 1019 81.2 87.2 (tr|I1NF70) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G17020.1 663 56.8 71.8 | Symbols: | F-box/RNI-like superfamily protein | chr2:7396559-7398787 REVERSE LENGTH=656
Medicago Medtr1g114010.1 1011 79.6 86.9 | F-box/LRR protein | HC | chr1:51436266-51432963 | 20130731
Soybean Glyma20g23880.1 1019 81.2 87.2  
LJGI gnl|LJGI|TC76321 2296 99.9 99.9 similar to UniRef100_A7R6C9 Cluster: Chromosome undetermined scaffold_1232, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1232, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2258370.1 length: 645 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.3e-05 15-51
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 3.5e+02 102-127
317-342
369-394
396-419
445-470
473-498
499-524
533-558
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.1e-28 15-291
299-570
HMMPanther PTHR23125 F-BOX/LEUCINE 2.4e-205 2-645
HMMPanther PTHR23125:SF54 GB 2.4e-205 2-645
HMMPfam PF13516 LRR_6 1.6 397-417
Seg seg seg NA 67-82
479-490
superfamily SSF52047 RNI-like 3.5e-10 296-570
35-281
Wolf-PSORT
Lj5g3v2258370.1	nucl 5.5, cyto_nucl 5.5, cyto 4.5, chlo 2, plas 1, cysk 1, chlo_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2258370.1