Miyakogusa Predicted Gene

Lj5g3v2258310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NF74_SOYBN 552 60.7 72.6 (tr|I1NF74) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G17033.1 397 48.0 64.2 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7401205-7403207 FORWARD LENGTH=504
Medicago Medtr1g113720.1 531 61.7 74.9 | pentatricopeptide (PPR) repeat protein | HC | chr1:51309529-51311014 | 20130731
Soybean Glyma20g23950.1 551 63.2 75.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2258310.1 length: 461 aa.
IPR002625 Smr protein/MutS2 C-terminal
method AccNumber shortName E-value location
HMMSmart SM00463 Small 2.8e-13 362-449
ProfileScan PS50828 SMR 13.879 365-455
IPR002885 Pentatricopeptide repeat
HMMPfam PF01535 PPR 0.23 197-224
234-261
268-296
HMMTigr TIGR00756 PPR: 0.0014 196-229
no_ID  
Coil coil coiled-coil NA 132-153
HMMPanther PTHR24015 FAMILY 5.5e-83 44-404
HMMPanther PTHR24015:SF30 SUBFAMILY 5.5e-83 44-404
Seg seg seg NA 22-34
57-62
79-104
328-338
Wolf-PSORT
Lj5g3v2258310.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2258310.1