Miyakogusa Predicted Gene

Lj5g3v2246110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NF81_SOYBN 1546 84.7 88.4 (tr|I1NF81) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G16950.2 1301 69.8 80.9 | Symbols: TRN1, ATTRN1 | transportin 1 | chr2:7353939-7360637 FORWARD LENGTH=891
Medicago Medtr1g112920.1 1470 81.5 86.6 | transportin-1 protein | HC | chr1:51202869-51217176 | 20130731
Soybean Glyma10g42960.1 1532 84.1 88.6  
LJGI gnl|LJGI|TC79994 848 99.3 99.3 similar to UniRef100_A7P8F9 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2246110.1 length: 890 aa.
IPR000357 HEAT
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02985 HEAT 0.00041 665-693
IPR001494 Importin-beta, N-terminal
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006886 intracellular protein transport    
Molecular Function GO:0008565 protein transporter activity    
HMMPfam PF03810 IBN_N 1.5e-11 36-101
HMMSmart SM00913 Importin-beta 4.7e-07 35-103
ProfileScan PS50166 IMPORTIN_B_NT 9.487 35-103
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 8.1e-145 128-321
324-878
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 7.8e-162 1-883
no_ID  
HMMPanther PTHR10527 IMPORTIN 0 4-888
HMMPanther PTHR10527:SF3 TRANSPORTIN-1 0 4-888
HMMPfam PF13513 HEAT_EZ 2.7e-07 405-458
Seg seg seg NA 113-127
351-359
501-518
639-670
Wolf-PSORT
Lj5g3v2246110.1	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2246110.1