Miyakogusa Predicted Gene

Lj5g3v2244610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LF47_SOYBN 696 74.3 80.4 (tr|I1LF47) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G16910.1 356 46.5 62.0 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:7331721-7334077 FORWARD LENGTH=571
Medicago Medtr1g112680.1 641 71.3 77.6 | transcription factor aborted microspores-like protein | HC | chr1:51008905-51011549 | 20130731
Soybean Glyma10g42830.1 679 72.9 79.2  
LJGI gnl|LJGI|TC76489 708 100.0 100.0 similar to UniRef100_A7P8D1 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2244610.1 length: 501 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2e-15 274-331
HMMPfam PF00010 HLH 1.6e-09 275-318
HMMSmart SM00353 helix 3.3e-15 274-323
ProfileScan PS50888 BHLH 15.294 268-317
superfamily SSF47459 HLH, 2.3e-16 266-330
IPR025610 Transcription factor MYC/MYB N-terminal
HMMPfam PF14215 bHLH-MYC_N 6.9e-08 13-87
no_ID  
Coil coil coiled-coil NA 307-335
HMMPanther PTHR23042 CIRCADIAN 3.2e-43 241-333
HMMPanther PTHR23042:SF21 BHLH 3.2e-43 241-333
Seg seg seg NA 118-134
superfamily SSF55021 ACT-like 1.7e-07 399-487
Wolf-PSORT
Lj5g3v2244610.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2244610.1