Miyakogusa Predicted Gene

Lj5g3v2243530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B2LUR1_MALDO 128 48.2 66.7 (tr|B2LUR1) SKP1-like protein 1 OS=Malus domestica PE=2 SV=1
TAIR_pep AT1G75950.1 119 44.8 64.8 | Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase kinase-associated protein 1 | chr1:28516715-28517454 FORWARD LENGTH=160
Medicago Medtr5g022730.1 121 46.4 65.0 | SCF ubiquitin ligase, SKP1 component | HC | chr5:8991146-8992974 | 20130731
Soybean Glyma11g08440.1 128 48.6 66.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2243530.1 length: 156 aa.
IPR001232 SKP1 component
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPanther PTHR11165 SKP1 3.2e-47 5-155
HMMSmart SM00512 Found 9.2e-11 6-104
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 9.7e-46 4-155
superfamily SSF54695 POZ 3.9e-08 7-70
IPR016072 SKP1 component, dimerisation
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF01466 Skp1 1.1e-30 77-154
superfamily SSF81382 Skp1 1.4e-26 77-152
IPR016073 SKP1 component, POZ
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF03931 Skp1_POZ 1.3e-07 16-68
IPR016897 E3 ubiquitin ligase, SCF complex, Skp subunit
HMMPIR PIRSF028729 E3 4.1e-38 1-155
no_ID  
Seg seg seg NA 140-156
Wolf-PSORT
Lj5g3v2243530.1	cyto 10, chlo 2, golg 1, chlo_mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2243530.1