Miyakogusa Predicted Gene

Lj5g3v2242520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D7LCN3_ARALL 143 48.1 61.7 (tr|D7LCN3) Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481069 PE=4 SV=1
TAIR_pep AT2G25700.1 136 46.8 60.1 | Symbols: ASK3, SK3 | SKP1-like 3 | chr2:10948914-10949551 REVERSE LENGTH=163
Medicago Medtr4g032450.1 138 45.0 64.4 | SCF ubiquitin ligase, SKP1 component | HC | chr4:11174465-11174992 | 20130731
Soybean Glyma11g08440.1 140 50.0 69.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2242520.1 length: 154 aa.
IPR001232 SKP1 component
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPanther PTHR11165 SKP1 1.8e-50 5-154
HMMSmart SM00512 Found 3.9e-12 6-104
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 4.4e-48 4-154
superfamily SSF54695 POZ 3.9e-08 7-70
IPR016072 SKP1 component, dimerisation
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF01466 Skp1 1.1e-33 77-154
superfamily SSF81382 Skp1 8.1e-28 77-152
IPR016073 SKP1 component, POZ
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF03931 Skp1_POZ 1.3e-07 16-68
IPR016897 E3 ubiquitin ligase, SCF complex, Skp subunit
HMMPIR PIRSF028729 E3 2.9e-39 1-154
Wolf-PSORT
Lj5g3v2242520.1	cyto 11, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2242520.1