Miyakogusa Predicted Gene

Lj5g3v2241460.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SEW9_LOTJA 273 90.4 91.1 (tr|I3SEW9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G23740.1 258 83.6 88.4 | Symbols: RPS11-BETA | ribosomal protein S11-beta | chr5:8008251-8009330 REVERSE LENGTH=159
Medicago Medtr8g076830.1 266 86.3 89.7 | 40S ribosomal protein S11-1 | HC | chr8:32588568-32586048 | 20130731
Soybean Glyma09g12430.1 269 88.4 91.1  
LJGI gnl|LJGI|TC58042 868 100.0 100.0 homologue to UniRef100_Q9M5M1 Cluster: 40S ribosomal protein S11; n=1; Euphorbia esula|Rep: 40S ribosomal protein S11 - Euphorbia esula (Leafy spurge), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2241460.3 length: 146 aa.
IPR000266 Ribosomal protein S17
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD001295 Q7XIK5_ORYSA_Q7XIK5; 5e-35 70-140
FPrintScan PR00973 RIBOSOMALS17 5.7e-12 88-111
121-131
131-138
HMMPanther PTHR10744 40S 2.5e-106 1-146
HMMPfam PF00366 Ribosomal_S17 1.3e-29 74-143
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 3.7e-38 67-146
superfamily SSF50249 Nucleic 3.8e-27 68-146
IPR019978 Ribosomal protein S17, archaeal
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR03630 arch_S17P: 1.8e-34 55-143
IPR019979 Ribosomal protein S17, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00056 RIBOSOMAL_S17 NA 121-133
no_ID  
HMMPanther PTHR10744:SF2 40S 2.5e-106 1-146
Seg seg seg NA 20-32
Wolf-PSORT
Lj5g3v2241460.3	cyto 11, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2241460.3