Miyakogusa Predicted Gene

Lj5g3v2241450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IY87_MEDTR 209 42.0 58.3 (tr|G7IY87) B3 domain-containing transcription factor VRN1 OS=Medicago truncatula GN=MTR_140s0011 PE=4 SV=1
TAIR_pep AT3G18990.1 110 25.4 44.6 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional factor family protein | chr3:6549077-6551568 REVERSE LENGTH=341
Medicago Medtr3g061320.1 209 42.0 58.3 | plant-specific B3-DNA-binding domain protein | LC | chr3:24354366-24356126 | 20130731
Soybean Glyma20g24270.1 190 38.7 53.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2241450.1 length: 284 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.1e-09 8-69
194-278
HMMSmart SM01019 B3 0.0047 2-70
191-284
ProfileScan PS50863 B3 10.729 1-70
191-284
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 2.3e-12 7-80
186-282
superfamily SSF101936 DNA-binding 2.2e-11 1-78
185-282
Wolf-PSORT
Lj5g3v2241450.1	chlo 6, cyto 4, nucl 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2241450.1