Miyakogusa Predicted Gene

Lj5g3v2241010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L204_SOYBN 447 48.9 56.9 (tr|K7L204) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G02070.1 334 76.1 82.2 | Symbols: AtIDD5, IDD5 | indeterminate(ID)-domain 5 | chr2:505523-509154 FORWARD LENGTH=602
Medicago Medtr1g112270.2 398 67.3 71.2 | C2H2 zinc finger protein, putative | HC | chr1:50790900-50782752 | 20130731
Soybean Glyma20g24370.1 407 68.1 71.8  
LJGI gnl|LJGI|TC74949 1624 100.0 100.0 similar to UniRef100_A7QBW3 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2241010.1 length: 607 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 77-97
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.990 75-97
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00058 74-97
139-172
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.5e+02 75-97
116-146
151-171
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 8.6e-158 43-580
HMMPanther PTHR10593:SF17 SUBFAMILY 8.6e-158 43-580
Seg seg seg NA 2-9
30-44
149-159
257-266
308-318
332-373
396-417
454-487
577-593
595-607
superfamily SSF57667 C2H2 0.00014 146-189
67-102
Wolf-PSORT
Lj5g3v2241010.1	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2241010.1