Miyakogusa Predicted Gene
- Lj5g3v2240940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S927_LOTJA |
207 |
87.6 |
87.6 |
(tr|I3S927) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G54260.1 |
100 |
56.6 |
78.9 |
| Symbols: TBL36 | TRICHOME BIREFRINGENCE-LIKE 36 | chr3:20085097-20086745 REVERSE LENGTH=379 |
| Medicago |
Medtr1g112210.2 |
160 |
81.1 |
88.9 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr1:50751765-50749939 | 20130731 |
| Soybean |
Glyma20g24410.1 |
169 |
69.9 |
77.0 |
|
| LJGI |
gnl|LJGI|FS324514 |
674 |
100.0 |
100.0 |
similar to UniRef100_A7QUX5 Cluster: Chromosome chr13 scaffold_181, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_181, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2240940.1 |
length: 164 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
2.2e-21 |
58-110 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
3.5e-21 |
28-113 |
| HMMPanther |
PTHR32285:SF0 |
SUBFAMILY |
3.5e-21 |
28-113 |
| Seg |
seg |
seg |
NA |
12-24 |
- Wolf-PSORT
Lj5g3v2240940.1 extr 8, nucl 3, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2240940.1 |
|