Miyakogusa Predicted Gene

Lj5g3v2240930.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL C7S8D2_SOYBN 322 90.8 94.8 (tr|C7S8D2) Germin-like protein 18 OS=Glycine max PE=2 SV=1
TAIR_pep AT3G10080.1 232 62.1 76.9 | Symbols: | RmlC-like cupins superfamily protein | chr3:3107476-3108159 REVERSE LENGTH=227
Medicago Medtr1g112200.1 317 82.2 86.9 | germin family 1 protein | HC | chr1:50747864-50748766 | 20130731
Soybean Glyma20g24420.1 322 90.8 94.8  
LJGI gnl|LJGI|TC59954 73.8 89.2 89.2 similar to UniRef100_A7PPE9 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2240930.1 length: 208 aa.
IPR001929 Germin
method AccNumber shortName E-value location
Molecular Function GO:0030145 manganese ion binding    
Cellular Component GO:0048046 apoplast    
FPrintScan PR00325 GERMIN 2.3e-25 102-122
132-152
165-180
IPR006045 Cupin 1
Molecular Function GO:0045735 nutrient reservoir activity    
HMMPfam PF00190 Cupin_1 5e-27 72-198
HMMSmart SM00835 Cupin 7.4e-41 55-200
IPR011051 RmlC-like cupin domain
superfamily SSF51182 RmlC-like 2.2e-41 36-207
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 7.8e-61 20-206
IPR019780 Germin, manganese binding site
Molecular Function GO:0030145 manganese ion binding    
PatternScan PS00725 GERMIN NA 97-110
no_ID  
HMMPanther PTHR31238 FAMILY 2e-72 4-206
Seg seg seg NA 8-19
194-208
Wolf-PSORT
Lj5g3v2240930.1	extr 7, chlo 3, cyto 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2240930.1