Miyakogusa Predicted Gene

Lj5g3v2240910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LLW2_SOYBN 581 80.9 85.8 (tr|K7LLW2) Lipoyl synthase, chloroplastic OS=Glycine max GN=LIP1P PE=3 SV=1
TAIR_pep AT5G08415.1 546 90.1 95.2 | Symbols: | Radical SAM superfamily protein | chr5:2710983-2713101 REVERSE LENGTH=394
Medicago Medtr1g050432.1 586 78.4 82.5 | lipoyl synthase | HC | chr1:19390953-19395413 | 20130731
Soybean Glyma20g24430.1 625 87.6 91.3  
LJGI gnl|LJGI|TC60498 1350 100.0 100.0 similar to UniRef100_A7QNP2 Cluster: Chromosome undetermined scaffold_133, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_133, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2240910.1 length: 340 aa.
IPR003698 Lipoyl synthase
method AccNumber shortName E-value location
Biological Process GO:0009107 lipoate biosynthetic process    
Molecular Function GO:0016992 lipoate synthase activity    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HAMAP MF_00206 Lipoyl_synth 133.561 58-340
HMMPIR PIRSF005963 Lipoyl 5e-183 11-339
HMMPanther PTHR10949 LIPOYL 5.2e-207 30-340
HMMTigr TIGR00510 lipA: 3.9e-122 54-339
IPR006638 Elongator protein 3/MiaB/NifB
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMSmart SM00729 Elongator 3.6e-13 110-319
IPR007197 Radical SAM
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF04055 Radical_SAM 1.9e-14 118-278
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 4.6e-59 74-340
IPR027526 Lipoyl synthase, chloroplastic
Biological Process GO:0009107 lipoate biosynthetic process    
Cellular Component GO:0009507 chloroplast    
Molecular Function GO:0016992 lipoate synthase activity    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HAMAP MF_03129 Lipoyl_synth_plantC 56.062 7-340
no_ID  
HMMPanther PTHR10949:SF0 LIPOYL 5.2e-207 30-340
superfamily SSF102114 Radical 3.9e-56 68-338
Wolf-PSORT
Lj5g3v2240910.1	chlo 9, mito 2, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2240910.1