Miyakogusa Predicted Gene

Lj5g3v2240860.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1NFD2_SOYBN 2144 81.9 87.4 (tr|I1NFD2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G60740.1 1623 64.3 76.6 | Symbols: TTN1, EMB133, TFC D, CHO | ARM repeat superfamily protein | chr3:22447385-22453325 REVERSE LENGTH=1254
Medicago Medtr1g112130.1 2001 77.8 84.9 | beta-tubulin folding cofactor D | HC | chr1:50690872-50704113 | 20130731
Soybean Glyma10g42560.1 2142 81.7 87.3  
LJGI gnl|LJGI|AV780944 902 96.1 96.1 similar to UniRef100_Q8L5R3 Cluster: Tubulin folding cofactor D; n=1; Arabidopsis thaliana|Rep: Tubulin folding cofactor D - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2240860.3 length: 1273 aa.
IPR011989 Armadillo-like helical
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.10.10 no description 2.9e-15 386-527
1118-1211
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 0.0073 226-1219
33-136
943-1220
IPR021133 HEAT, type 2
ProfileScan PS50077 HEAT_REPEAT 8.831 394-431
IPR022577 Tubulin-specific chaperone D, C-terminal
HMMPfam PF12612 TFCD_C 6.7e-47 948-1141
no_ID  
HMMPanther PTHR12658 BETA-TUBULIN 0 2-1252
Seg seg seg NA 107-118
426-441
451-481
Wolf-PSORT
Lj5g3v2240860.3	plas 6, E.R. 4, nucl 3, golg_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2240860.3