Miyakogusa Predicted Gene

Lj5g3v2238710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHT4_SOYBN 732 62.9 69.0 (tr|K7KHT4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G75410.2 314 42.3 55.3 | Symbols: BLH3 | BEL1-like homeodomain 3 | chr1:28300095-28301890 REVERSE LENGTH=524
Medicago Medtr1g023050.1 689 59.3 67.8 | BEL1-related homeotic protein | HC | chr1:7304717-7300327 | 20130731
Soybean Glyma14g07710.1 730 61.3 68.6  
LJGI gnl|LJGI|TC59712 1203 100.0 100.0 homologue to UniRef100_A7NT59 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2238710.1 length: 556 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 1.6e-09 330-394
ProfileScan PS50071 HOMEOBOX_2 12.438 327-390
IPR006563 POX
HMMPfam PF07526 POX 1e-48 144-288
HMMSmart SM00574 domain 1.7e-58 139-289
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 4.3e-16 347-386
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 4.8e-27 333-395
superfamily SSF46689 Homeodomain-like 1.9e-17 328-405
no_ID  
HMMPanther PTHR11850 HOMEOBOX 8.9e-113 5-480
HMMPanther PTHR11850:SF15 HOMEOBOX 8.9e-113 5-480
Seg seg seg NA 185-194
202-213
312-323
Wolf-PSORT
Lj5g3v2238710.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2238710.1