Miyakogusa Predicted Gene

Lj5g3v2237620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NFE2_SOYBN 421 93.1 94.5 (tr|I1NFE2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54300.2 399 87.2 92.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated membrane protein 727 | chr3:20108355-20110127 REVERSE LENGTH=240
Medicago Medtr1g111890.1 410 92.7 94.5 | synaptobrevin-like protein | HC | chr1:50596698-50600474 | 20130731
Soybean Glyma20g24540.2 421 93.1 94.5  
LJGI gnl|LJGI|TC61866 1296 100.0 100.0 similar to UniRef100_A7QL20 Cluster: Chromosome undetermined scaffold_116, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_116, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2237620.1 length: 218 aa.
IPR001388 Synaptobrevin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016192 vesicle-mediated transport    
FPrintScan PR00219 SYNAPTOBREVN 1.4e-13 154-173
174-193
210-218
HMMPfam PF00957 Synaptobrevin 1.8e-26 148-218
PatternScan PS00417 SYNAPTOBREVIN NA 167-186
ProfileScan PS50892 V_SNARE 19.248 149-209
IPR010908 Longin domain
Gene3D G3DSA:3.30.450.50 no description 2.2e-40 4-131
HMMPfam PF13774 Longin 8.1e-24 31-105
ProfileScan PS50859 LONGIN 24.994 6-133
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 3.1e-26 5-141
no_ID  
Gene3D G3DSA:1.10.3840.10 no description 3.5e-37 132-217
HMMPanther PTHR21136 SNARE 7.1e-101 3-218
HMMPanther PTHR21136:SF8 VAMP-7 7.1e-101 3-218
Seg seg seg NA 107-113
Wolf-PSORT
Lj5g3v2237620.1	chlo 3, nucl 3, cyto 2, mito 2, nucl_plas 2, plas 1, extr 1, E.R. 1, golg 1, cyto_mito 1, golg_plas 1, cyto_pero 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2237620.1