Miyakogusa Predicted Gene

Lj5g3v2235530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NFE9_SOYBN 1108 84.7 92.1 (tr|I1NFE9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G04780.1 722 56.7 75.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:1384540-1386447 FORWARD LENGTH=635
Medicago Medtr1g111670.1 1063 81.2 89.5 | pentatricopeptide (PPR) repeat protein | HC | chr1:50487581-50485585 | 20130731
Soybean Glyma20g24630.1 1108 84.7 92.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2235530.1 length: 621 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.018 84-110
114-143
187-211
215-243
388-412
HMMPfam PF13041 PPR_2 6.7e-12 314-361
HMMTigr TIGR00756 PPR: 0.0026 215-248
316-350
351-385
ProfileScan PS51375 PPR 5.163 81-115
116-146
213-247
182-212
314-348
283-313
248-282
349-384
385-419
451-485
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.2e-07 351-480
no_ID  
Coil coil coiled-coil NA 511-532
HMMPanther PTHR24015 FAMILY 7.5e-262 50-621
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 7.5e-262 50-621
HMMPfam PF14432 DYW_deaminase 3.1e-15 497-611
Wolf-PSORT
Lj5g3v2235530.1	chlo 6, mito 3, extr 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2235530.1