Miyakogusa Predicted Gene

Lj5g3v2224380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SHH5_RICCO 285 83.3 94.0 (tr|B9SHH5) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1121820 PE=4 SV=1
TAIR_pep AT5G18230.1 219 71.5 84.8 | Symbols: | transcription regulator NOT2/NOT3/NOT5 family protein | chr5:6021610-6027031 REVERSE LENGTH=843
Medicago Medtr7g085350.1 276 87.9 95.3 | transcription regulator NOT2/NOT3/NOT5 family protein | HC | chr7:33041291-33054371 | 20130731
Soybean Glyma19g28580.2 282 89.3 96.7  
LJGI gnl|LJGI|TC59154 874 99.3 99.3 similar to UniRef100_A2Q5Q7 Cluster: Not CCR4-Not complex component, N-terminal; tRNA-binding arm; n=1; Medicago truncatula|Rep: Not CCR4-Not complex component, N-terminal; tRNA-binding arm - Medicago truncatula (Barrel medic), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2224380.1 length: 150 aa.
IPR007282 NOT2/NOT3/NOT5
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF04153 NOT2_3_5 3.4e-43 3-145
no_ID  
HMMPanther PTHR23326 CCR4 3e-51 1-150
HMMPanther PTHR23326:SF0 SUBFAMILY 3e-51 1-150
Wolf-PSORT
Lj5g3v2224380.1	nucl 6, mito 5, cyto 1, plas 1, extr 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2224380.1