Miyakogusa Predicted Gene

Lj5g3v2220310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NFF3_SOYBN 505 85.4 90.4 (tr|I1NFF3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G04310.1 422 73.2 83.3 | Symbols: | Pectin lyase-like superfamily protein | chr5:1203356-1207352 REVERSE LENGTH=518
Medicago Medtr1g111590.1 491 86.3 90.7 | pectate lyase family protein | HC | chr1:50437999-50435574 | 20130731
Soybean Glyma20g24670.1 505 85.4 90.4  
LJGI gnl|LJGI|TC69958 1098 98.2 98.2 similar to UniRef100_Q27U75 Cluster: Pectate lyase; n=1; Eucalyptus globulus subsp. globulus|Rep: Pectate lyase - Eucalyptus globulus subsp. globulus (Tasmanian blue gum), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2220310.1 length: 356 aa.
IPR002022 Pectate lyase/Amb allergen
method AccNumber shortName E-value location
HMMPfam PF00544 Pec_lyase_C 2.4e-61 5-191
HMMSmart SM00656 no description 3e-90 1-197
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2.6e-71 1-267
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 7.6e-97 1-265
IPR018082 AmbAllergen
FPrintScan PR00807 AMBALLERGEN 1.4e-51 8-24
72-93
152-171
174-193
216-240
245-268
no_ID  
HMMPanther PTHR31683 FAMILY 3.1e-149 1-281
HMMPanther PTHR31683:SF0 SUBFAMILY 3.1e-149 1-281
Seg seg seg NA 37-49
281-307
313-346
Wolf-PSORT
Lj5g3v2220310.1	cyto 4, golg 3, cyto_nucl 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2220310.1