Miyakogusa Predicted Gene

Lj5g3v2217170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9FVD7_MEDSV 1065 95.2 97.6 (tr|Q9FVD7) Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform OS=Medicago sativa subsp. varia PE=2 SV=1
TAIR_pep AT3G25800.1 1037 91.6 96.9 | Symbols: PDF1, PR 65, PP2AA2 | protein phosphatase 2A subunit A2 | chr3:9422822-9425783 REVERSE LENGTH=587
Medicago Medtr1g111270.1 1070 95.6 97.8 | serine/threonine protein phosphatase 2A regulatory subunit A | HC | chr1:50251306-50258533 | 20130731
Soybean Glyma20g24790.1 1064 95.1 98.4  
LJGI gnl|LJGI|TC65043 1852 89.3 89.3 homologue to UniRef100_Q9FVD7 Cluster: Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform; n=1; Medicago sativa subsp. x varia|Rep: Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform - Medicago varia (Alfalfa), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2217170.1 length: 547 aa.
IPR011989 Armadillo-like helical
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.10.10 no description 4.5e-135 3-544
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.5e-96 3-545
IPR021133 HEAT, type 2
ProfileScan PS50077 HEAT_REPEAT 10.573 8-46
162-200
201-239
240-278
279-317
318-356
357-395
396-434
474-512
513-547
no_ID  
HMMPanther PTHR10648 SERINE/THREONINE-PROTEIN 3.9e-281 3-544
HMMPfam PF10363 DUF2435 1.9 159-230
HMMPfam PF13513 HEAT_EZ 0.0008 175-229
HMMPfam PF13646 HEAT_2 2.6e-08 246-340
363-458
Wolf-PSORT
Lj5g3v2217170.1	chlo 5, cyto 3, plas 2, vacu 2, cyto_nucl 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2217170.1