Miyakogusa Predicted Gene
- Lj5g3v2183730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NFK4_SOYBN |
474 |
77.5 |
87.0 |
(tr|I1NFK4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G68290.1 |
385 |
64.3 |
78.1 |
| Symbols: ENDO 2 | endonuclease 2 | chr1:25596718-25598264 FORWARD LENGTH=290 |
| Medicago |
Medtr1g110510.1 |
454 |
74.3 |
85.6 |
| S1/P1 nuclease family protein | HC | chr1:49867132-49864872 | 20130731 |
| Soybean |
Glyma20g25090.1 |
474 |
77.5 |
87.0 |
|
| LJGI |
gnl|LJGI|CB829579 |
1057 |
100.0 |
100.0 |
similar to UniRef100_A7P393 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2183730.1 |
length: 283 aa. |
| IPR003154 |
S1/P1 nuclease |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| Molecular Function |
GO:0004519 |
endonuclease activity |
|
|
| Biological Process |
GO:0006308 |
DNA catabolic process |
|
|
| HMMPfam |
PF02265 |
S1-P1_nuclease |
5.7e-82 |
25-282 |
| IPR008947 |
Phospholipase C/P1 nuclease domain |
| Molecular Function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
|
| Gene3D |
G3DSA:1.10.575.10 |
no description |
8.9e-92 |
25-282 |
| superfamily |
SSF48537 |
Phospholipase |
1.2e-76 |
25-283 |
| no_ID |
|
| HMMPanther |
PTHR32188 |
FAMILY |
5.9e-99 |
1-283 |
- Wolf-PSORT
Lj5g3v2183730.1 extr 10, cyto 2, chlo 1, nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2183730.1 |
|