Miyakogusa Predicted Gene
- Lj5g3v2182450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NFM6_SOYBN |
702 |
88.6 |
91.4 |
(tr|I1NFM6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G68410.2 |
620 |
76.5 |
83.6 |
| Symbols: | Protein phosphatase 2C family protein | chr1:25650262-25652255 REVERSE LENGTH=436 |
| Medicago |
Medtr1g110210.1 |
615 |
94.0 |
97.2 |
| protein phosphatase 2C family protein | HC | chr1:49705150-49706843 | 20130731 |
| Soybean |
Glyma20g25360.2 |
702 |
88.6 |
91.4 |
|
| LJGI |
gnl|LJGI|TC80218 |
1806 |
99.8 |
99.8 |
similar to UniRef100_Q8W588 Cluster: At1g09160/T12M4_13; n=1; Arabidopsis thaliana|Rep: At1g09160/T12M4_13 - Arabidopsis thaliana (Mouse-ear cress), partial (81%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2182450.1 |
length: 402 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
4.6e-56 |
35-300 |
| HMMPfam |
PF00481 |
PP2C |
3e-36 |
59-280 |
| HMMSmart |
SM00331 |
Sigma |
0.0013 |
31-298 |
| HMMSmart |
SM00332 |
Serine/threonine |
6.5e-57 |
28-296 |
| superfamily |
SSF81606 |
PP2C-like |
8.2e-50 |
12-303 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
5.2e-198 |
39-399 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF158PROTEIN |
PHOSPHATASE |
5.2e-198 |
39-399 |
| Seg |
seg |
seg |
NA |
318-339 |
- Wolf-PSORT
Lj5g3v2182450.1 nucl 5, cyto 4, mito 3, chlo 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2182450.1 |
|