Miyakogusa Predicted Gene

Lj5g3v2182120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J4T8_SOYBN 1066 84.2 91.1 (tr|I1J4T8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G25960.1 936 74.3 85.3 | Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273
Medicago Medtr5g029750.1 1028 81.5 90.3 | ABC transporter B family-like protein | HC | chr5:12514487-12523815 | 20130731
Soybean Glyma01g02060.1 1066 84.2 91.1  
LJGI gnl|LJGI|AV776921 321 85.7 85.7 similar to UniRef100_A7PC62 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2182120.1 length: 627 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 1.4e-41 376-618
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.8e-22 99-224
ProfileScan PS50893 ABC_TRANSPORTER_2 24.990 57-293
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.7e-15 84-270
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 8.9e-40 359-617
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 196-210
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 34.946 374-627
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.4e-67 36-279
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 7e-34 359-617
Gene3D G3DSA:3.40.50.300 no description 2.6e-81 56-289
HMMPanther PTHR24221 FAMILY 3.2e-282 1-617
HMMPanther PTHR24221:SF24 SUBFAMILY 3.2e-282 1-617
Wolf-PSORT
Lj5g3v2182120.1	plas 10, golg 2, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2182120.1