Miyakogusa Predicted Gene
- Lj5g3v2179870.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LES9_SOYBN |
178 |
73.7 |
80.5 |
(tr|I1LES9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G01200.2 |
93.6 |
40.7 |
56.6 |
| Symbols: IAA32 | indole-3-acetic acid inducible 32 | chr2:118385-119219 FORWARD LENGTH=191 |
| Medicago |
Medtr1g109510.1 |
147 |
65.8 |
73.7 |
| auxin-responsive AUX/IAA family protein | HC | chr1:49537832-49539058 | 20130731 |
| Soybean |
Glyma10g41640.1 |
178 |
73.7 |
80.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2179870.1 |
length: 124 aa. |
| IPR003311 |
AUX/IAA protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02309 |
AUX_IAA |
1.3e-22 |
34-124 |
| IPR011525 |
Aux/IAA-ARF-dimerisation |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| ProfileScan |
PS50962 |
IAA_ARF |
25.917 |
53-124 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
87-103 |
- Wolf-PSORT
Lj5g3v2179870.1 nucl 6, chlo 3, cyto 3, cysk_nucl 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2179870.1 |
|